| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 132434 |
| Arabian Sea | Sea/Bay/Gulf | native | 106287 |
| Bonaparte Coast | Sea/Bay/Gulf | native | 106854 |
| Central Indo-Pacific | sea/bay/gulf | native | 343 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 343 |
| East China Sea | Sea/Bay/Gulf | native | 75927 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 106854 |
| Gulf of Oman | Sea/Bay/Gulf | native | 106287 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 343 |
| Indian Ocean | Sea/Bay/Gulf | native | 74687 |
| Lesser Sunda | Sea/Bay/Gulf | native | 343 |
| Pacific Ocean | Sea/Bay/Gulf | native | 74687 |
| Persian Gulf | Sea/Bay/Gulf | native | 801 |
| Red Sea | Sea/Bay/Gulf | native | 3766 |
| Red Sea and Gulf of Aden | sea/bay/gulf | native | 3766 |
| Shark Bay | Sea/Bay/Gulf | native | 116259 |
| Somali/Arabian | sea/bay/gulf | native | 801 |
| South China Sea | Sea/Bay/Gulf | native | 343 |
| Southern China | Sea/Bay/Gulf | native | 343 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 343 |
| Sunda Shelf | sea/bay/gulf | native | 343 |
| Temperate Northern Pacific | sea/bay/gulf | native | 75927 |
| West Philippine Sea | Sea/Bay/Gulf | native | 343 |
| Western Coral Triangle | sea/bay/gulf | native | 343 |
| Western Indo-Pacific | sea/bay/gulf | native | 801 |