| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Bonaparte Coast | Sea/Bay/Gulf | native | 106854 |
| Central Indo-Pacific | sea/bay/gulf | native | 3147 |
| Cocos-Keeling/Christmas Island | Sea/Bay/Gulf | native | 3147 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 106854 |
| Fiji Islands | Sea/Bay/Gulf | native | 343 |
| Indian Ocean | Sea/Bay/Gulf | native | 106854 |
| Java Transitional | sea/bay/gulf | native | 3147 |
| Lesser Sunda | Sea/Bay/Gulf | native | 343 |
| New Caledonia | Sea/Bay/Gulf | native | 343 |
| Pacific Ocean | Sea/Bay/Gulf | native | 343 |
| South China Sea | Sea/Bay/Gulf | native | 343 |
| Southern China | Sea/Bay/Gulf | native | 125407 |
| Sunda Shelf | sea/bay/gulf | native | 343 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 103283 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 343 |
| West Caroline Islands | Sea/Bay/Gulf | native | 103283 |
| West Philippine Sea | Sea/Bay/Gulf | native | 343 |
| Western Coral Triangle | sea/bay/gulf | native | 343 |