| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 569 |
| Bonaparte Coast | Sea/Bay/Gulf | native | 106854 |
| Central and Southern Great Barrier Reef | Sea/Bay/Gulf | native | 132434 |
| Central Indo-Pacific | sea/bay/gulf | native | 3147 |
| Central Polynesia | sea/bay/gulf | native | 96667 |
| Cocos-Keeling/Christmas Island | Sea/Bay/Gulf | native | 3147 |
| Davao Gulf | Sea/Bay/Gulf | native | 2897 |
| Eastern Indo-Pacific | sea/bay/gulf | native | 77016 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 106854 |
| Indian Ocean | Sea/Bay/Gulf | native | 96667 |
| Java Transitional | sea/bay/gulf | native | 3147 |
| Marquesas | Sea/Bay/Gulf | native | 77016 |
| Marquesas - province | Sea/Bay/Gulf | native | 77016 |
| New Caledonia | Sea/Bay/Gulf | native | 3477 |
| North Australian Shelf | Sea/Bay/Gulf | native | 132434 |
| Pacific Ocean | Sea/Bay/Gulf | native | 77016 |
| Persian Gulf | Sea/Bay/Gulf | native | 107862 |
| Red Sea | Sea/Bay/Gulf | native | 3766 |
| Red Sea and Gulf of Aden | sea/bay/gulf | native | 3766 |
| Seychelles | Sea/Bay/Gulf | native | 3334 |
| Society Islands | Sea/Bay/Gulf | native | 77016 |
| Somali/Arabian | sea/bay/gulf | native | 107862 |
| South China Sea | Sea/Bay/Gulf | native | 81564 |
| Southeast Polynesia | sea/bay/gulf | native | 77016 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 3477 |
| West Philippine Sea | Sea/Bay/Gulf | native | 81564 |
| Western Indian Ocean | sea/bay/gulf | native | 3334 |
| Western Indo-Pacific | sea/bay/gulf | native | 107862 |