| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arabian Sea | Sea/Bay/Gulf | native | 81548 |
| Central Indian Ocean Islands | sea/bay/gulf | native | 81548 |
| Central Indo-Pacific | sea/bay/gulf | native | 631 |
| Davao Gulf | Sea/Bay/Gulf | native | 82802 |
| Eastern Coral Triangle | sea/bay/gulf | native | 800 |
| Fiji Islands | Sea/Bay/Gulf | native | 800 |
| Indian Ocean | Sea/Bay/Gulf | native | 800 |
| Maldives | Sea/Bay/Gulf | native | 81548 |
| New Caledonia | Sea/Bay/Gulf | native | 800 |
| Pacific Ocean | Sea/Bay/Gulf | native | 800 |
| Red Sea | Sea/Bay/Gulf | native | 800 |
| Red Sea and Gulf of Aden | sea/bay/gulf | native | 800 |
| Solomon Archipelago | Sea/Bay/Gulf | native | 800 |
| South China Sea | Sea/Bay/Gulf | native | 81548 |
| South China Sea Oceanic Islands | Sea/Bay/Gulf | native | 631 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 800 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 800 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| West Caroline Islands | Sea/Bay/Gulf | native | 864 |
| West Philippine Sea | Sea/Bay/Gulf | native | 81548 |
| Western Indo-Pacific | sea/bay/gulf | native | 81548 |