| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Banda Sea | Sea/Bay/Gulf | native | 122032 |
| Bonaparte Coast | Sea/Bay/Gulf | native | 106854 |
| Central Indo-Pacific | sea/bay/gulf | native | 3147 |
| Central Polynesia | sea/bay/gulf | native | 343 |
| Cocos-Keeling/Christmas Island | Sea/Bay/Gulf | native | 3147 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 343 |
| East Caroline Islands | Sea/Bay/Gulf | native | 343 |
| Eastern Coral Triangle | sea/bay/gulf | native | 343 |
| Eastern Indo-Pacific | sea/bay/gulf | native | 343 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 106854 |
| Fiji Islands | Sea/Bay/Gulf | native | 343 |
| Gilbert/Ellis Islands | Sea/Bay/Gulf | native | 343 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 343 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 343 |
| Hawaii | Sea/Bay/Gulf | native | 343 |
| Hawaii - province | Sea/Bay/Gulf | native | 343 |
| Indian Ocean | Sea/Bay/Gulf | native | 343 |
| Java Transitional | sea/bay/gulf | native | 3147 |
| Lesser Sunda | Sea/Bay/Gulf | native | 343 |
| Line Islands | Sea/Bay/Gulf | native | 343 |
| Marshall Islands | Sea/Bay/Gulf | native | 343 |
| Marshall, Gilbert, and Ellis Islands | sea/bay/gulf | native | 343 |
| New Caledonia | Sea/Bay/Gulf | native | 100477 |
| Pacific Ocean | Sea/Bay/Gulf | native | 343 |
| Polynesian Waters | Sea/Bay/Gulf | native | 343 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 343 |
| Red Sea | Sea/Bay/Gulf | native | 122032 |
| Society Islands | Sea/Bay/Gulf | native | 77016 |
| Solomon Archipelago | Sea/Bay/Gulf | native | 343 |
| South China Sea | Sea/Bay/Gulf | native | 343 |
| Southeast Polynesia | sea/bay/gulf | native | 343 |
| Southern China | Sea/Bay/Gulf | native | 132434 |
| Southern Cook/Austral Islands | Sea/Bay/Gulf | native | 343 |
| Sunda Shelf | sea/bay/gulf | native | 343 |
| Tonga Islands | Sea/Bay/Gulf | native | 343 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 343 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 343 |
| Vanuatu | Sea/Bay/Gulf | native | 343 |
| West Caroline Islands | Sea/Bay/Gulf | native | 343 |
| West Philippine Sea | Sea/Bay/Gulf | native | 343 |
| Western Coral Triangle | sea/bay/gulf | native | 343 |
| Western Indo-Pacific | sea/bay/gulf | native | 96667 |