| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman | sea/bay/gulf | native | 106338 |
| Andaman Sea | Sea/Bay/Gulf | native | 106338 |
| Andaman Sea Coral Coast | Sea/Bay/Gulf | native | 343 |
| Arabian Sea | Sea/Bay/Gulf | native | 106352 |
| Bay of Bengal | Sea/Bay/Gulf | native | 106338 |
| Bonaparte Coast | Sea/Bay/Gulf | native | 106854 |
| Central Indian Ocean Islands | sea/bay/gulf | native | 106338 |
| Central Indo-Pacific | sea/bay/gulf | native | 3147 |
| Central Polynesia | sea/bay/gulf | native | 96667 |
| Clipperton | Sea/Bay/Gulf | native | 96667 |
| Cocos-Keeling/Christmas Island | Sea/Bay/Gulf | native | 3147 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 343 |
| Davao Gulf | Sea/Bay/Gulf | native | 2897 |
| East African Coral Coast | Sea/Bay/Gulf | native | 96667 |
| East China Sea | Sea/Bay/Gulf | native | 103046 |
| Eastern Coral Triangle | sea/bay/gulf | native | 343 |
| Eastern Indo-Pacific | sea/bay/gulf | native | 343 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 106854 |
| Fiji Islands | Sea/Bay/Gulf | native | 343 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 3197 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 106342 |
| Gulf of Oman | Sea/Bay/Gulf | native | 106352 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 343 |
| Hawaii | Sea/Bay/Gulf | native | 343 |
| Hawaii - province | Sea/Bay/Gulf | native | 343 |
| Indian Ocean | Sea/Bay/Gulf | native | 343 |
| Java Transitional | sea/bay/gulf | native | 3147 |
| Lesser Sunda | Sea/Bay/Gulf | native | 343 |
| Maldives | Sea/Bay/Gulf | native | 106338 |
| Marquesas | Sea/Bay/Gulf | native | 343 |
| Marquesas - province | Sea/Bay/Gulf | native | 343 |
| New Caledonia | Sea/Bay/Gulf | native | 343 |
| Northern and Central Red Sea | Sea/Bay/Gulf | native | 106342 |
| Ogasawara Islands | Sea/Bay/Gulf | native | 103054 |
| Pacific Ocean | Sea/Bay/Gulf | native | 343 |
| Persian Gulf | Sea/Bay/Gulf | native | 106338 |
| Polynesian Waters | Sea/Bay/Gulf | native | 77016 |
| Red Sea | Sea/Bay/Gulf | native | 3565 |
| Red Sea and Gulf of Aden | sea/bay/gulf | native | 3565 |
| Sahul Shelf | sea/bay/gulf | native | 343 |
| Sea of Marmara | Sea/Bay/Gulf | native | 96925 |
| Society Islands | Sea/Bay/Gulf | native | 97241 |
| Solomon Archipelago | Sea/Bay/Gulf | native | 343 |
| Somali/Arabian | sea/bay/gulf | native | 106352 |
| South China Sea | Sea/Bay/Gulf | native | 343 |
| South India and Sri Lanka | Sea/Bay/Gulf | native | 106281 |
| Southeast Polynesia | sea/bay/gulf | native | 343 |
| Southern China | Sea/Bay/Gulf | native | 132434 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 343 |
| Sunda Shelf | sea/bay/gulf | native | 343 |
| Temperate Australasia | sea/bay/gulf | native | 89432 |
| Temperate Northern Pacific | sea/bay/gulf | native | 96667 |
| Tropical Eastern Pacific | sea/bay/gulf | native | 96667 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 106347 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 343 |
| Tuamotus | Sea/Bay/Gulf | native | 343 |
| Vanuatu | Sea/Bay/Gulf | native | 105098 |
| West and South Indian Shelf | sea/bay/gulf | native | 97578 |
| West Caroline Islands | Sea/Bay/Gulf | native | 103281 |
| West Philippine Sea | Sea/Bay/Gulf | native | 343 |
| Western Coral Triangle | sea/bay/gulf | native | 343 |
| Western Indian Ocean | sea/bay/gulf | native | 96667 |
| Western Indo-Pacific | sea/bay/gulf | native | 106338 |