| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arabian Sea | Sea/Bay/Gulf | native | 848 |
| Central Indo-Pacific | sea/bay/gulf | native | 75728 |
| East African Coral Coast | Sea/Bay/Gulf | native | 848 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 848 |
| Eastern Coral Triangle | sea/bay/gulf | native | 75728 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 848 |
| Houtman | Sea/Bay/Gulf | native | 848 |
| Indian Ocean | Sea/Bay/Gulf | native | 848 |
| New Caledonia | Sea/Bay/Gulf | native | 102239 |
| North Australian Shelf | Sea/Bay/Gulf | native | 848 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 848 |
| Northern and Central Red Sea | Sea/Bay/Gulf | native | 848 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 848 |
| Pacific Ocean | Sea/Bay/Gulf | native | 848 |
| Persian Gulf | Sea/Bay/Gulf | native | 107255 |
| Red Sea | Sea/Bay/Gulf | native | 848 |
| Red Sea and Gulf of Aden | sea/bay/gulf | native | 848 |
| Solomon Sea | Sea/Bay/Gulf | native | 75728 |
| Southern Red Sea | Sea/Bay/Gulf | native | 848 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 102239 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| Western Indian Ocean | sea/bay/gulf | native | 848 |
| Western Indo-Pacific | sea/bay/gulf | native | 848 |